STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZED8Asm-1. (83 aa)    
Predicted Functional Partners:
A0A2T6ZE83
Uncharacterized protein.
 
      0.900
A0A2T6ZPA5
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.877
A0A2T6ZFY4
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.865
A0A2T6ZJT0
Nitrate reductase.
    
 0.811
A0A2T6ZQR5
Uncharacterized protein.
    
 0.712
A0A2T7A2P0
Uncharacterized protein.
    
  0.672
A0A2T6ZX87
Nucleoside diphosphate kinase.
    
 0.662
A0A2T6ZDQ9
Uncharacterized protein.
    
  0.654
A0A2T6ZTN6
Ribosomal protein S5 domain 2-type protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.654
A0A2T6ZNI6
Ribosomal protein S2, flavodoxin-like domain-containing protein; Belongs to the universal ribosomal protein uS2 family.
    
  0.653
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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