A0A2T6ZF34 protein (Tuber borchii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2T6ZF34

FHA domain-containing protein. (809 aa)

Predicted Functional Partners:

A0A2T6ZUI2

0.998

A0A2T6ZF72

0.994

A0A2T7A0V7

0.989

A0A2T7A195

0.972

A0A2T7A1G3

0.972

A0A2T6ZRZ7

0.967

A0A2T6ZWN1

0.965

A0A2T6ZZX1

0.963

A0A2T7A0S2

0.948

A0A2T6ZU29

0.909

Your Current Organism:

Tuber borchii

NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2T6ZF34	A0A2T6ZF72	FHA domain-containing protein.	AAA_23 domain-containing protein.	0.994
A0A2T6ZF34	A0A2T6ZRZ7	FHA domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.967
A0A2T6ZF34	A0A2T6ZU29	FHA domain-containing protein.	BRCT domain-containing protein.	0.909
A0A2T6ZF34	A0A2T6ZUI2	FHA domain-containing protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.998
A0A2T6ZF34	A0A2T6ZWN1	FHA domain-containing protein.	BRCT domain-containing protein.	0.965
A0A2T6ZF34	A0A2T6ZZX1	FHA domain-containing protein.	BRCT domain-containing protein.	0.963
A0A2T6ZF34	A0A2T7A0S2	FHA domain-containing protein.	BRCT domain-containing protein.	0.948
A0A2T6ZF34	A0A2T7A0V7	FHA domain-containing protein.	3'-5' exonuclease domain-containing protein.	0.989
A0A2T6ZF34	A0A2T7A195	FHA domain-containing protein.	Telomere-length maintenance and DNA damage repair-domain-containing protein.	0.972
A0A2T6ZF34	A0A2T7A1G3	FHA domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.972
A0A2T6ZF72	A0A2T6ZF34	AAA_23 domain-containing protein.	FHA domain-containing protein.	0.994
A0A2T6ZF72	A0A2T6ZRZ7	AAA_23 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.970
A0A2T6ZF72	A0A2T6ZU29	AAA_23 domain-containing protein.	BRCT domain-containing protein.	0.793
A0A2T6ZF72	A0A2T6ZUI2	AAA_23 domain-containing protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.999
A0A2T6ZF72	A0A2T6ZWN1	AAA_23 domain-containing protein.	BRCT domain-containing protein.	0.936
A0A2T6ZF72	A0A2T6ZZX1	AAA_23 domain-containing protein.	BRCT domain-containing protein.	0.944
A0A2T6ZF72	A0A2T7A0S2	AAA_23 domain-containing protein.	BRCT domain-containing protein.	0.870
A0A2T6ZF72	A0A2T7A0V7	AAA_23 domain-containing protein.	3'-5' exonuclease domain-containing protein.	0.986
A0A2T6ZF72	A0A2T7A195	AAA_23 domain-containing protein.	Telomere-length maintenance and DNA damage repair-domain-containing protein.	0.961
A0A2T6ZF72	A0A2T7A1G3	AAA_23 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.961