STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZGS0BTB domain-containing protein. (600 aa)    
Predicted Functional Partners:
A0A2T6ZN55
Cullin; Belongs to the cullin family.
    
 0.891
A0A2T6ZX93
Cullin; Belongs to the cullin family.
    
 0.891
A0A2T6ZHH7
RING-type domain-containing protein.
    
 0.873
A0A2T6ZJL5
Ubiquitin-conjugating enzyme E2-18 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.805
A0A2T6ZCR9
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
    
  0.696
A0A2T7A7L7
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
    
  0.695
A0A2T6ZMA0
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
    
  0.691
A0A2T6ZMY7
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
    
  0.691
A0A2T6ZIX8
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.688
A0A2T6ZJ06
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
    
  0.688
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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