STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZGS4ZPR1 zinc-finger domain-domain-containing protein. (480 aa)    
Predicted Functional Partners:
A0A2T6ZRN7
Uracil phosphoribosyltransferase-domain-containing protein.
 
      0.897
A0A2T6ZYD1
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 
 0.880
A0A2T7A087
Noc2p family-domain-containing protein.
   
    0.658
A0A2T7A2M3
WD_REPEATS_REGION domain-containing protein.
   
    0.614
A0A2T6ZDJ4
Brix domain-domain-containing protein.
   
    0.595
A0A2T6ZCA7
P-loop containing nucleoside triphosphate hydrolase protein.
   
    0.594
A0A2T6ZLD4
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.594
A0A2T6ZLE3
Uncharacterized protein.
   
    0.594
A0A2T6ZRS3
DnaJ domain-containing protein.
   
  
 0.579
A0A2T6ZE05
Ribosomal protein L6, alpha-beta domain-containing protein.
 
 
    0.518
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
Server load: high (84%) [HD]