STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZGS6Uncharacterized protein. (315 aa)    
Predicted Functional Partners:
A0A2T6ZUB6
WD40-repeat-containing domain protein.
    
 0.912
A0A2T6ZLJ6
MI domain-containing protein.
    
 0.903
A0A2T7A2L3
Uncharacterized protein.
    
 0.900
A0A2T7A2Z4
SYF2 splicing factor-domain-containing protein.
    
 0.885
A0A2T7A445
PWI domain-containing protein.
   
 0.873
A0A2T7A379
Pre-mRNA splicing Prp18-interacting factor-domain-containing protein.
    
 0.862
A0A2T6ZLZ6
Pre-mRNA splicing factor-domain-containing protein.
   
 0.860
A0A2T6ZF63
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.859
A0A2T7A484
Small nuclear ribonucleoprotein G.
    
 0.858
A0A2T6ZX43
RRM domain-containing protein.
    
 0.850
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.