A0A2T6ZH92 protein (Tuber borchii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2T6ZH92

P-loop containing nucleoside triphosphate hydrolase protein. (493 aa)

Predicted Functional Partners:

A0A2T6ZPB2

0.873

A0A2T7A1T6

0.841

A0A2T6ZT74

0.781

A0A2T7A247

0.781

A0A2T7A5T7

0.781

A0A2T7A2F9

0.746

A0A2T6ZWG7

0.722

A0A2T7A9A8

0.670

A0A2T6ZC89

0.654

A0A2T7A139

0.654

Your Current Organism:

Tuber borchii

NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2T6ZC89	A0A2T6ZH92	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.654
A0A2T6ZC89	A0A2T6ZPB2	Uncharacterized protein.	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	0.948
A0A2T6ZC89	A0A2T6ZT74	Uncharacterized protein.	Uncharacterized protein.	0.491
A0A2T6ZC89	A0A2T6ZWG7	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.629
A0A2T6ZC89	A0A2T7A247	Uncharacterized protein.	Cytochrome c-like domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.491
A0A2T6ZC89	A0A2T7A5T7	Uncharacterized protein.	Cytochrome c-like domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.491
A0A2T6ZH92	A0A2T6ZC89	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.654
A0A2T6ZH92	A0A2T6ZPB2	P-loop containing nucleoside triphosphate hydrolase protein.	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	0.873
A0A2T6ZH92	A0A2T6ZT74	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.781
A0A2T6ZH92	A0A2T6ZWG7	P-loop containing nucleoside triphosphate hydrolase protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.722
A0A2T6ZH92	A0A2T7A139	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.654
A0A2T6ZH92	A0A2T7A1T6	P-loop containing nucleoside triphosphate hydrolase protein.	TPR_REGION domain-containing protein.	0.841
A0A2T6ZH92	A0A2T7A247	P-loop containing nucleoside triphosphate hydrolase protein.	Cytochrome c-like domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.781
A0A2T6ZH92	A0A2T7A2F9	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.746
A0A2T6ZH92	A0A2T7A5T7	P-loop containing nucleoside triphosphate hydrolase protein.	Cytochrome c-like domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.781
A0A2T6ZH92	A0A2T7A9A8	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.670
A0A2T6ZPB2	A0A2T6ZC89	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.948
A0A2T6ZPB2	A0A2T6ZH92	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	P-loop containing nucleoside triphosphate hydrolase protein.	0.873
A0A2T6ZPB2	A0A2T6ZWG7	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.997
A0A2T6ZPB2	A0A2T7A139	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.948