STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZHT039S mitochondrial ribosomal protein L46-domain-containing protein. (359 aa)    
Predicted Functional Partners:
A0A2T6ZTA0
Mitochondrial ribosomal protein L28-domain-containing protein.
   
 
 0.996
A0A2T6ZCI4
Ribosomal protein L22/L17; Belongs to the universal ribosomal protein uL22 family.
   
   0.995
A0A2T6ZWB7
Uncharacterized protein.
   
 
 0.995
A0A2T7A010
Translation protein SH3-like domain-containing protein.
   
 
 0.994
A0A2T6ZKT3
Mitochondrial 54S ribosomal protein YmL9.
   
 
 0.993
A0A2T6ZPW1
Thioredoxin-like protein.
   
 
 0.993
A0A2T7A5E0
Ribosomal protein L18e/L15P.
   
 
 0.993
A0A2T6ZDF5
Ribosomal protein L25/L23.
   
 
 0.992
A0A2T6ZHS2
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.992
A0A2T6ZZ76
Mitochondrial 39-S ribosomal protein L47 (MRP-L47)-domain-containing protein.
   
 
 0.992
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.