STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZIF2Tryptophan synthase beta subunit-like PLP-dependent enzyme. (548 aa)    
Predicted Functional Partners:
A0A2T7A439
GHMP kinase.
 
 
 0.998
A0A2T6ZIG7
Homoserine dehydrogenase.
  
 0.976
A0A2T6ZF01
Threonine dehydratase.
  
 
 0.929
A0A2T6ZAS9
Uncharacterized protein.
  
 
 0.915
A0A2T6ZHK1
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
  
 
 0.913
A0A2T6ZPJ0
Pyridoxal phosphate-dependent transferase.
   
 0.903
A0A2T6ZMR5
HAD-like domain-containing protein.
    
 0.854
A0A2T6ZYN7
Aspartokinase.
  
 0.835
A0A2T7A3D8
Aspartokinase.
  
 0.835
A0A2T7A3G3
Pyridoxal phosphate-dependent transferase.
  
 0.827
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.