STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZIM3Uncharacterized protein. (285 aa)    
Predicted Functional Partners:
A0A2T7A2T6
Bms1-type G domain-containing protein.
   
   0.991
A0A2T6ZSL7
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.979
A0A2T6ZPJ5
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.974
A0A2T6ZLN5
Uncharacterized protein.
   
 
 0.967
A0A2T6ZV68
Dip2/Utp12 family-domain-containing protein.
   
   0.966
A0A2T6ZKT9
Anticodon-binding protein.
   
 
 0.965
A0A2T7A5N2
Sas10 C-terminal domain-domain-containing protein.
   
 
 0.964
A0A2T7A1P3
Apoptosis antagonizing transcription factor-domain-containing protein.
   
   0.955
A0A2T6ZKC2
Ribosomal protein S4/S9 N-terminal domain-domain-containing protein.
   
   0.954
A0A2T6ZSS6
Nucleolar protein 14.
   
 
 0.953
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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