STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZJW3Uncharacterized protein. (241 aa)    
Predicted Functional Partners:
A0A2T6ZFU6
CNH domain-domain-containing protein.
    
 0.960
A0A2T6ZPJ7
WSC domain-containing protein.
     
 0.814
A0A2T6ZRN6
Uncharacterized protein.
    
 0.780
A0A2T7A982
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.778
A0A2T6ZSX9
NTF2 domain-containing protein.
    
 0.777
A0A2T7A090
NPL4 family-domain-containing protein.
    
 0.758
A0A2T6ZLM1
ERCC4 domain-containing protein.
    
 0.752
A0A2T6ZDP3
RPA_C domain-containing protein.
    
  0.733
A0A2T6ZUI6
ERCC4 domain-containing protein.
    
 0.733
A0A2T7A2Z3
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.688
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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