STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZKK4WW domain-containing protein. (243 aa)    
Predicted Functional Partners:
A0A2T6Z9Q7
Cell differentiation family, Rcd1-like-domain-containing protein.
    
 0.872
A0A2T6ZB53
Not1 N-terminal domain, CCR4-Not complex component-domain-containing protein.
    
 0.872
A0A2T6ZGC5
Uncharacterized protein.
    
 0.872
A0A2T6ZIY4
Uncharacterized protein.
    
 0.869
A0A2T7A4Y6
Endonuclease/exonuclease/phosphatase.
    
 0.866
A0A2T6ZZ39
Ribonuclease H-like domain-containing protein.
    
 0.864
A0A2T6ZDL6
NOT2_3_5 domain-containing protein.
   
 0.845
A0A2T6ZL44
Uncharacterized protein.
   
 0.845
A0A2T7A1E1
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 0.722
A0A2T6ZYZ4
FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]
    
 0.695
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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