STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZKU2WD40-repeat-containing domain protein. (493 aa)    
Predicted Functional Partners:
A0A2T6ZCA7
P-loop containing nucleoside triphosphate hydrolase protein.
   
   0.957
A0A2T7A087
Noc2p family-domain-containing protein.
   
 
 0.921
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.901
A0A2T7A2T1
Utp21 specific WD40 associated putative domain-domain-containing protein.
   
 
 0.890
A0A2T6ZKG0
Ribosomal protein L1p/L10e family-domain-containing protein.
   
 
 0.869
A0A2T7A8K0
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.861
A0A2T6ZK86
WD40-repeat-containing domain protein.
   
  
 0.850
A0A2T6ZCW5
WD40-repeat-containing domain protein.
   
  
 0.841
A0A2T6ZL18
Bystin-domain-containing protein.
   
  
 0.837
A0A2T7A088
Nucleolar protein,Nop52-domain-containing protein.
   
   0.837
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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