STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZL99Uncharacterized protein. (368 aa)    
Predicted Functional Partners:
A0A2T6ZN41
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.785
A0A2T6ZKV6
Ribosomal protein L21e-domain-containing protein.
   
   0.770
A0A2T6ZBR3
Putative cyclin dependent kinase inhibitor Pho81.
    
 0.726
A0A2T6ZYI1
Putative 60S ribosomal protein L2.
   
 
 0.723
A0A2T7A010
Translation protein SH3-like domain-containing protein.
   
 
 0.721
A0A2T6ZNH5
Ribosomal protein L13 domain-containing protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.717
A0A2T7A4W2
Putative 60S ribosomal protein L39.
   
   0.706
A0A2T6ZKE3
Ubiquitin-60S ribosomal protein L40 fusion protein.
    
  0.696
A0A2T7A2U9
RRN7-type domain-containing protein.
    
  0.696
A0A2T7A359
Eukaryotic porin-domain-containing protein.
    
 0.696
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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