STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZLE3Uncharacterized protein. (1045 aa)    
Predicted Functional Partners:
A0A2T6ZIG0
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 0.996
A0A2T7A6G0
RNA polymerase I associated factor, A49-like protein.
   
 0.993
A0A2T6ZFN1
DNA-directed RNA polymerase.
  
 0.991
A0A2T6ZK22
Uncharacterized protein.
   
 0.986
A0A2T6ZRP7
DNA-directed RNA polymerase.
   
 0.984
A0A2T7A2Y9
RNA polymerase.
  
 0.984
A0A2T6ZKA0
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.983
A0A2T6ZXD7
RNA polymerase, subunit omega/K/RPB6.
  
 0.983
A0A2T7A2P5
RNA polymerase I-specific transcription initiation factor RRN3.
   
 0.981
A0A2T6ZKV8
DNA-directed RNA polymerase, subunit N/Rpb10.
   
 0.977
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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