STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZLW2Vacuolar sorting protein 39 domain 1-domain-containing protein. (1025 aa)    
Predicted Functional Partners:
A0A2T6ZBR2
Pep3/Vps18/deep orange family-domain-containing protein.
   
 0.998
A0A2T6ZPJ2
Uncharacterized protein.
   
 0.998
A0A2T6ZUA4
E3 ubiquitin-protein ligase PEP5.
   
 0.998
A0A2T7A0V5
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
   
 0.998
A0A2T7A2L8
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.998
A0A2T6Z9R7
Small GTPase superfamily.
    
 
 0.961
A0A2T6ZW66
Uncharacterized protein.
    
 
 0.961
A0A2T7A0S4
CNH domain-containing protein.
    
 
0.959
A0A2T7A1X0
Putative snare protein; Belongs to the synaptobrevin family.
    
 
 0.956
A0A2T6ZRK3
Golgi CORVET complex core vacuolar protein 8-domain-containing protein.
   
 
 0.937
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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