STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZN60CwfJ C-terminus 1-domain-containing protein-like protein. (527 aa)    
Predicted Functional Partners:
A0A2T6ZKU8
Pre-mRNA splicing factor component-domain-containing protein.
   
 
 0.937
A0A2T6ZMN5
Lariat debranching enzyme, C-terminal domain-domain-containing protein.
   
 
 0.798
A0A2T6ZPD5
Uncharacterized protein.
    
   0.634
A0A2T6ZAW8
WD40-repeat-containing domain protein.
   
 
 0.601
A0A2T7A2Z4
SYF2 splicing factor-domain-containing protein.
    
   0.566
A0A2T6ZRS4
G10 protein.
    
 
 0.513
A0A2T7A2S1
P-loop containing nucleoside triphosphate hydrolase protein.
    
   0.445
A0A2T7A2U2
Uncharacterized protein.
    
 
 0.433
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.