STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZND5Tr-type G domain-containing protein. (1306 aa)    
Predicted Functional Partners:
A0A2T6ZMC5
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.984
A0A2T7A5E0
Ribosomal protein L18e/L15P.
   
 0.984
A0A2T6ZPT5
Mitochondrial 54S ribosomal protein YmL19; Belongs to the universal ribosomal protein uL11 family.
  
 0.980
A0A2T6ZH51
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.979
A0A2T6ZNV4
60S ribosomal protein L5.
   
 
 0.977
A0A2T6ZTN6
Ribosomal protein S5 domain 2-type protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.973
A0A2T7A010
Translation protein SH3-like domain-containing protein.
   
 0.973
A0A2T6ZDQ9
Uncharacterized protein.
   
 0.970
A0A2T6ZNI6
Ribosomal protein S2, flavodoxin-like domain-containing protein; Belongs to the universal ribosomal protein uS2 family.
  
 0.970
A0A2T7A4R6
Uncharacterized protein.
   
 0.970
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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