STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZP69Uncharacterized protein. (616 aa)    
Predicted Functional Partners:
A0A2T6ZS08
DNA polymerase alpha/epsilon subunit B-domain-containing protein.
    
 0.773
A0A2T7A9I4
SMN domain-containing protein.
    
 0.763
A0A2T6ZPH1
DNA polymerase.
    
 0.753
A0A2T6ZUI6
ERCC4 domain-containing protein.
    
 0.735
A0A2T7A2Y1
WD40-repeat-containing domain protein.
   
 
 0.726
A0A2T6ZF63
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.721
A0A2T6ZK32
DNA polymerase delta, subunit 4-domain-containing protein.
    
 0.718
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.708
A0A2T6ZUV9
Small nuclear ribonucleoprotein Sm D2.
    
 0.707
A0A2T7A484
Small nuclear ribonucleoprotein G.
    
  0.700
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.