STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZQ55Velvet factor-domain-containing protein. (236 aa)    
Predicted Functional Partners:
A0A2T6ZUW3
MHYT domain-containing protein.
    
  0.685
A0A2T7A1Q8
WD40-repeat-containing domain protein.
   
 0.665
A0A2T6ZMC0
Ribosomal protein S11-domain-containing protein; Belongs to the universal ribosomal protein uS11 family.
    
  0.664
A0A2T7A0J0
Rix1 complex component.
    
 0.650
A0A2T6ZD06
Uncharacterized protein.
    
 0.636
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.573
A0A2T6ZIF0
Uncharacterized protein.
    
 0.571
A0A2T7A8I5
EF-hand protein; Belongs to the calmodulin family.
    
 0.571
A0A2T6ZBQ6
Ankyrin repeat-containing domain protein.
    
  0.527
A0A2T6ZFY5
Ankyrin repeat-containing domain protein.
    
  0.527
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.