STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZTR7RING-type domain-containing protein. (70 aa)    
Predicted Functional Partners:
A0A2T7A424
Uncharacterized protein.
     
 0.767
A0A2T7A2S2
E2_bind domain-containing protein.
     
 0.687
A0A2T6ZG83
UEV domain-domain-containing protein.
    
 
 0.595
A0A2T7A194
Uncharacterized protein.
   
 
 0.573
A0A2T6ZNH8
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
      
 0.467
A0A2T6ZEG2
Uncharacterized protein.
      
 0.461
A0A2T6ZH60
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
      
 0.461
A0A2T6ZJD4
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
      
 0.461
A0A2T6ZHA1
RING-type domain-containing protein.
    
 
 0.440
A0A2T6ZUQ4
Ankyrin repeat-containing domain protein.
    
 
 0.424
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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