STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZV05Bacterial low temperature requirement A protein-domain-containing protein. (593 aa)    
Predicted Functional Partners:
A0A2T6ZA06
PAS domain-containing protein.
    
 0.816
A0A2T7A464
Nineteen complex-related protein 2-domain-containing protein.
 
      0.811
A0A2T6ZCR3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.743
A0A2T6ZM94
Hist_deacetyl domain-containing protein.
    
 0.743
A0A2T6ZCY0
Uncharacterized protein.
    
 0.738
A0A2T6ZJ88
Uncharacterized protein.
    
 0.738
A0A2T6ZVX6
Bromo domain-containing protein.
    
 0.738
A0A2T6Z9T1
Kinetochore Sim4 complex subunit Fta4.
    
 0.730
A0A2T6Z9Z7
Uncharacterized protein.
    
 0.730
A0A2T6ZMQ5
Uncharacterized protein.
    
 0.730
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.