STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZXD8SWIRM domain-domain-containing protein. (772 aa)    
Predicted Functional Partners:
A0A2T6ZYR5
Uncharacterized protein.
   
 0.997
A0A2T7A0Z3
SWIB domain-containing protein.
    
 0.997
A0A2T6ZYI2
SNF2 family N-terminal domain-domain-containing protein.
   
 0.995
A0A2T6ZCE6
Actin family.
    
 0.990
A0A2T6ZV95
Uncharacterized protein.
   
 0.985
A0A2T6ZCT4
Bromo domain-containing protein.
   
 0.979
A0A2T6ZVZ7
Uncharacterized protein.
   
 0.976
A0A2T6ZTV9
SWIB domain-containing protein.
    
 0.973
A0A2T6ZIY9
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.965
A0A2T6ZW37
Uncharacterized protein; Belongs to the actin family.
    
 0.965
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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