STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZY09Translation machinery-associated protein 20; Involved in translation; Belongs to the TMA20 family. (181 aa)    
Predicted Functional Partners:
A0A2T6ZFK3
Translation machinery-associated protein 22.
   
 
 0.985
A0A2T6ZJS7
Translation initiation factor SUI1.
   
 
 0.904
A0A2T6ZYT8
Uncharacterized protein.
   
 
 0.904
A0A2T6ZY10
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
 
 
    0.872
A0A2T6ZII7
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.795
A0A2T6ZMC5
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
   0.788
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
   0.788
A0A2T6ZQT4
Ribosomal protein S17-domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
    
   0.762
A0A2T6ZKM6
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
   0.711
A0A2T6ZK23
Queuosine salvage protein; Involved in salvaging queuosine.
 
      0.709
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.