STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZZ38Uncharacterized protein. (64 aa)    
Predicted Functional Partners:
A0A2T6ZGX3
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
   
 
 0.876
A0A2T6ZTZ3
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.802
A0A2T6ZXV3
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
   
 
 0.797
A0A2T7A950
Thioredoxin-like [2Fe-2S] ferredoxin-domain-containing protein.
   
  
 0.555
A0A2T6ZVQ4
Cytochrome C1 family-domain-containing protein.
   
 
 0.512
A0A2T6ZW14
NmrA domain-containing protein.
   
 
 0.457
A0A2T6ZFG5
Choline/Carnitine o-acyltransferase-domain-containing protein.
    
   0.438
A0A2T6ZYK7
Uncharacterized protein.
   
    0.432
A0A2T6ZRM7
Armadillo-type protein.
    
   0.418
A0A2T6ZDH2
Nife hydrogenase-like protein; Belongs to the complex I 49 kDa subunit family.
   
  
 0.406
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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