STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZZW8Nucleoporin Nup120/160-domain-containing protein. (1225 aa)    
Predicted Functional Partners:
A0A2T6ZPI6
Nuclear protein 96-domain-containing protein.
    
 0.991
A0A2T6ZKR2
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
    
 0.985
A0A2T7A3U8
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.984
A0A2T6ZL31
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
    
 0.982
A0A2T6ZW96
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
  
 0.961
A0A2T6ZI27
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
   
 0.951
A0A2T6ZI40
Nucleoporin_N domain-containing protein.
   
 0.951
A0A2T6ZPC4
Nucleoporin subcomplex protein binding to Pom34-domain-containing protein.
   
 0.940
A0A2T6ZKF8
Nucleoporin complex subunit 54-domain-containing protein.
    
 0.916
A0A2T6ZJE1
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
   0.914
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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