STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T7A0L2Protein YIP. (260 aa)    
Predicted Functional Partners:
A0A2T7A2J6
Protein YIP.
   
 
 0.964
A0A2T6ZRL2
Golgi apparatus membrane protein TVP23; Golgi membrane protein involved in vesicular trafficking. Belongs to the TVP23 family.
   
 
 0.889
A0A2T6ZUM7
Uncharacterized protein.
   
 
 0.745
A0A2T6ZA06
PAS domain-containing protein.
 
      0.662
A0A2T6ZGA1
Vps5 C terminal like-domain-containing protein.
    
  0.614
A0A2T6ZMC6
Mu homology domain-containing protein; Belongs to the adaptor complexes medium subunit family.
     
 0.572
A0A2T6ZIH1
Uncharacterized protein.
 
      0.488
A0A2T6ZZG8
Fungal-specific transcription factor domain-domain-containing protein.
     
 0.473
A0A2T6ZJ82
PRA1 family protein.
      
 0.461
A0A2T6ZBJ4
Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.
    
  0.442
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
Server load: low (20%) [HD]