STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T7A2W1P-loop containing nucleoside triphosphate hydrolase protein. (592 aa)    
Predicted Functional Partners:
A0A2T6ZHS2
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.955
A0A2T6ZT57
Ribosomal L27 protein-domain-containing protein.
  
 
 0.935
A0A2T6ZXK2
Uncharacterized protein.
  
 
 0.935
A0A2T6ZSS3
Translation protein SH3-like domain-containing protein.
  
 
 0.926
A0A2T6ZEZ8
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.924
A0A2T6ZMN2
Translation protein SH3-like domain-containing protein.
   
 
 0.918
A0A2T6ZPT5
Mitochondrial 54S ribosomal protein YmL19; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.908
A0A2T6ZRG8
Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.908
A0A2T6ZL10
50S ribosomal protein L33.
    
   0.903
A0A2T6ZEK1
FtsJ-like methyltransferase-domain-containing protein.
   
 
 0.894
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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