STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T7A366Pyridoxal phosphate-dependent transferase. (555 aa)    
Predicted Functional Partners:
A0A2T6ZUF0
Aspartate aminotransferase.
   
 
 0.898
A0A2T7A0E1
Pyridoxal phosphate-dependent transferase.
    
 0.894
A0A2T7A7V0
Pyridoxal phosphate-dependent transferase.
    
 0.892
A0A2T6ZWL8
Amine oxidase.
     
 0.886
A0A2T6ZZP3
Amine oxidase.
     
 0.886
A0A2T7A0X9
Indoleamine 2,3-dioxygenase alpha/beta type.
   
 
 0.886
A0A2T6ZMF3
Histidine biosynthesis trifunctional protein.
    
 0.874
A0A2T6ZFG6
Tryptophan synthase.
    
 0.870
A0A2T7A0Q8
Acyl-CoA N-acyltransferase.
     
 0.826
A0A2T6ZHH2
Prephenate dehydratase-domain-containing protein.
     
 0.810
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.