STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T7A473LETM1-like protein-domain-containing protein. (542 aa)    
Predicted Functional Partners:
A0A2T7A7W1
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
 
  
   0.757
A0A2T7A0A9
PX domain-containing protein.
 
      0.694
A0A2T7A0Y1
Ribosomal protein S5, N-terminal domain-domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.690
A0A2T6ZCI4
Ribosomal protein L22/L17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.689
A0A2T6ZKM6
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.682
A0A2T6ZYI1
Putative 60S ribosomal protein L2.
    
 
 0.680
A0A2T6ZVK8
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.672
A0A2T6ZY97
Ribosomal protein L22/L17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.663
A0A2T7A010
Translation protein SH3-like domain-containing protein.
    
 
 0.661
A0A2T7A658
Guanine nucleotide-binding protein subunit beta-like protein.
    
 
 0.659
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.