STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T7A692DNA mismatch repair protein MutS. (809 aa)    
Predicted Functional Partners:
A0A2T6ZYT9
Muts domain V-domain-containing protein.
  
 0.987
A0A2T6ZYU1
DNA mismatch repair protein MutS.
  
 0.986
A0A2T6ZCN2
DNA_mis_repair domain-containing protein.
 
 0.961
A0A2T6ZXM6
Histidine kinase-like ATPase.
 
 0.953
A0A2T6ZTW3
MutL_C domain-containing protein.
 
 0.951
A0A2T6Z9Z6
Uncharacterized protein.
 
 0.948
A0A2T6ZE78
PIN domain-like protein.
   
 0.883
A0A2T6ZD07
Mysoin-binding motif of peroxisomes-domain-containing protein.
   
 0.868
A0A2T7A714
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.868
A0A2T6ZEY3
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
    
 0.832
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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