A0A2T7A8P7 protein (Tuber borchii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2T7A8P7

Uncharacterized protein. (111 aa)

Predicted Functional Partners:

A0A2T6ZSS6

0.987

A0A2T7A151

0.987

A0A2T7A5N2

0.987

A0A2T7A6F6

0.986

A0A2T6ZV68

0.985

A0A2T6ZPN0

0.984

A0A2T7A4P5

0.984

A0A2T7A7N2

0.983

A0A2T6ZLN5

0.982

A0A2T6ZPJ5

0.978

Your Current Organism:

Tuber borchii

NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2T6ZLN5	A0A2T6ZPJ5	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.997
A0A2T6ZLN5	A0A2T6ZPN0	Uncharacterized protein.	WD40-repeat-containing domain protein.	0.993
A0A2T6ZLN5	A0A2T6ZSS6	Uncharacterized protein.	Nucleolar protein 14.	0.994
A0A2T6ZLN5	A0A2T6ZV68	Uncharacterized protein.	Dip2/Utp12 family-domain-containing protein.	0.997
A0A2T6ZLN5	A0A2T7A151	Uncharacterized protein.	WD40-repeat-containing domain protein.	0.997
A0A2T6ZLN5	A0A2T7A4P5	Uncharacterized protein.	WD40-repeat-containing domain protein.	0.998
A0A2T6ZLN5	A0A2T7A5N2	Uncharacterized protein.	Sas10 C-terminal domain-domain-containing protein.	0.991
A0A2T6ZLN5	A0A2T7A6F6	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.946
A0A2T6ZLN5	A0A2T7A7N2	Uncharacterized protein.	WD40-repeat-containing domain protein.	0.991
A0A2T6ZLN5	A0A2T7A8P7	Uncharacterized protein.	Uncharacterized protein.	0.982
A0A2T6ZPJ5	A0A2T6ZLN5	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Uncharacterized protein.	0.997
A0A2T6ZPJ5	A0A2T6ZPN0	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	WD40-repeat-containing domain protein.	0.998
A0A2T6ZPJ5	A0A2T6ZSS6	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Nucleolar protein 14.	0.999
A0A2T6ZPJ5	A0A2T6ZV68	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Dip2/Utp12 family-domain-containing protein.	0.995
A0A2T6ZPJ5	A0A2T7A151	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	WD40-repeat-containing domain protein.	0.999
A0A2T6ZPJ5	A0A2T7A4P5	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	WD40-repeat-containing domain protein.	0.999
A0A2T6ZPJ5	A0A2T7A5N2	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Sas10 C-terminal domain-domain-containing protein.	0.999
A0A2T6ZPJ5	A0A2T7A6F6	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	P-loop containing nucleoside triphosphate hydrolase protein.	0.992
A0A2T6ZPJ5	A0A2T7A7N2	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	WD40-repeat-containing domain protein.	0.999
A0A2T6ZPJ5	A0A2T7A8P7	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Uncharacterized protein.	0.978