STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA56454.1Homologs of previously reported genes of unknown function. (148 aa)    
Predicted Functional Partners:
ALA56455.1
Putative Quercetin 2,3-dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the pirin family.
  
  
 0.705
ALA56458.1
Putative Glyoxalase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.659
ALA56457.1
Putative Glyoxalase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.626
ALA56456.1
Putative thiol oxidoreductase, DsbA family, FrnE subfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.623
ALA56459.1
Sigma-54 dependent transcriptional regulator.
       0.615
ALA60533.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.592
ALA60534.1
Hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0276 family.
  
  
 0.546
ALA60662.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.546
ALA56453.1
Hypothetical protein; No homology to any previously reported sequences.
       0.512
Your Current Organism:
Nitrospira moscoviensis
NCBI taxonomy Id: 42253
Other names: DSM 10035, N. moscoviensis, Nitrospira moscoviensis Ehrich et al. 2001, strain NSP M-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.