STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA56504.1Putative Fumarylacetoacetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (332 aa)    
Predicted Functional Partners:
ALA56505.1
Putative dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.975
ALA56506.1
Putative 4-hydroxyphenylpyruvate dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.875
putA
Bifunctional protein PutA; Belongs to the aldehyde dehydrogenase family.
 
 
 0.844
ALA56503.1
Putative Orotate phosphoribosyltransferase (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.791
bkdAA
2-oxoisovalerate dehydrogenase, alpha subunit (TPP-binding module); Function of strongly homologous gene; enzyme.
  
  
 0.741
atoB
Acetyl-CoA acetyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.723
bkdAB
2-oxoisovalerate dehydrogenase, beta subunit; Function of strongly homologous gene; enzyme.
  
  
 0.722
ALA56500.1
Branched-chain alpha-keto acid dehydrogenase, dihydrolipoamide acyltransferase (E2) component; Function of strongly homologous gene; enzyme.
  
   0.678
mmgB
Putative 3-hydroxybutyryl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.633
aclA
ATP citrate lyase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.618
Your Current Organism:
Nitrospira moscoviensis
NCBI taxonomy Id: 42253
Other names: DSM 10035, N. moscoviensis, Nitrospira moscoviensis Ehrich et al. 2001, strain NSP M-1
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