STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureFPutative urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (228 aa)    
Predicted Functional Partners:
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 
 0.998
ALA57691.1
Putative urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. Belongs to the UreD family.
 
 
 0.997
ureC
Urease alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.996
ureA
Urease gamma subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the urease gamma subunit family.
 
 
 0.977
ureB
Urease subunit beta (modular protein); Function of strongly homologous gene; enzyme; Belongs to the urease beta subunit family.
 
 
 0.974
hypB
Hydrogenase nickel incorporation protein HypB; Function of strongly homologous gene; enzyme.
  
 
 0.963
ALA57679.1
Putative urea ABC transporter, urea binding protein UrtA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
   
 0.567
ALA57687.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.542
adh
Alcohol dehydrogenase; Function of strongly homologous gene; enzyme.
      
 0.521
adh-3
Alcohol dehydrogenase; Function of strongly homologous gene; enzyme.
      
 0.521
Your Current Organism:
Nitrospira moscoviensis
NCBI taxonomy Id: 42253
Other names: DSM 10035, N. moscoviensis, Nitrospira moscoviensis Ehrich et al. 2001, strain NSP M-1
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