Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALA57564.1 | ALA58058.1 | NITMOv2_1133 | NITMOv2_1634 | Homologs of previously reported genes of unknown function. | Membrane protein of unknown function; No homology to any previously reported sequences. | 0.499 |
ALA58058.1 | ALA57564.1 | NITMOv2_1634 | NITMOv2_1133 | Membrane protein of unknown function; No homology to any previously reported sequences. | Homologs of previously reported genes of unknown function. | 0.499 |
ALA58058.1 | ALA58059.1 | NITMOv2_1634 | NITMOv2_1635 | Membrane protein of unknown function; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.773 |
ALA58058.1 | cusA | NITMOv2_1634 | NITMOv2_1633 | Membrane protein of unknown function; No homology to any previously reported sequences. | Copper/silver efflux system, membrane component; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.414 |
ALA58059.1 | ALA58058.1 | NITMOv2_1635 | NITMOv2_1634 | Hypothetical protein; No homology to any previously reported sequences. | Membrane protein of unknown function; No homology to any previously reported sequences. | 0.773 |
ALA58059.1 | cusA | NITMOv2_1635 | NITMOv2_1633 | Hypothetical protein; No homology to any previously reported sequences. | Copper/silver efflux system, membrane component; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.414 |
cusA | ALA58058.1 | NITMOv2_1633 | NITMOv2_1634 | Copper/silver efflux system, membrane component; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Membrane protein of unknown function; No homology to any previously reported sequences. | 0.414 |
cusA | ALA58059.1 | NITMOv2_1633 | NITMOv2_1635 | Copper/silver efflux system, membrane component; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Hypothetical protein; No homology to any previously reported sequences. | 0.414 |