STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA58303.1Type III restriction protein res subunit. (944 aa)    
Predicted Functional Partners:
ALA58309.1
Putative Site-specific DNA-methyltransferase (adenine-specific); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.973
ALA58307.1
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.968
ALA57886.1
N-6 DNA methylase.
 
 
 0.842
ALA57887.1
Type I restriction-modification system DNA specificity subunit.
 
 
 0.804
ALA58383.1
Modification methylase XhoI.
  
 
 0.772
ALA59438.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.683
ALA58305.1
Plasmid stabilization system protein.
 
     0.605
ALA59465.1
Hypothetical protein; No homology to any previously reported sequences.
  
    0.542
ALA58306.1
Hypothetical protein; No homology to any previously reported sequences.
 
    
0.514
ALA58308.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
       0.514
Your Current Organism:
Nitrospira moscoviensis
NCBI taxonomy Id: 42253
Other names: DSM 10035, N. moscoviensis, Nitrospira moscoviensis Ehrich et al. 2001, strain NSP M-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.