Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALA58567.1 | ALA58568.1 | NITMOv2_2150 | NITMOv2_2151 | Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Putative Flagellar protein FlaG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.982 |
| ALA58567.1 | ALA58592.1 | NITMOv2_2150 | NITMOv2_2175 | Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.939 |
| ALA58567.1 | ALA58593.1 | NITMOv2_2150 | NITMOv2_2176 | Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | First flagellar hook-filament junction protein FlgK (modular protein); Belongs to the flagella basal body rod proteins family. | 0.980 |
| ALA58567.1 | csrA | NITMOv2_2150 | NITMOv2_2174 | Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Carbon storage regulator-like protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.738 |
| ALA58567.1 | flgM | NITMOv2_2150 | NITMOv2_2178 | Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Anti-sigma 28 factor FlgM. | 0.891 |
| ALA58567.1 | fliC | NITMOv2_2150 | NITMOv2_2152 | Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.982 |
| ALA58567.1 | fliF | NITMOv2_2150 | NITMOv2_1916 | Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.976 |
| ALA58567.1 | fliS | NITMOv2_2150 | NITMOv2_2149 | Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellin-specific chaperone FliS. | 0.995 |
| ALA58567.1 | fliW | NITMOv2_2150 | NITMOv2_2173 | Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.850 |
| ALA58568.1 | ALA58567.1 | NITMOv2_2151 | NITMOv2_2150 | Putative Flagellar protein FlaG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.982 |
| ALA58568.1 | ALA58592.1 | NITMOv2_2151 | NITMOv2_2175 | Putative Flagellar protein FlaG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.779 |
| ALA58568.1 | ALA58593.1 | NITMOv2_2151 | NITMOv2_2176 | Putative Flagellar protein FlaG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | First flagellar hook-filament junction protein FlgK (modular protein); Belongs to the flagella basal body rod proteins family. | 0.796 |
| ALA58568.1 | csrA | NITMOv2_2151 | NITMOv2_2174 | Putative Flagellar protein FlaG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Carbon storage regulator-like protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.741 |
| ALA58568.1 | fliC | NITMOv2_2151 | NITMOv2_2152 | Putative Flagellar protein FlaG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.886 |
| ALA58568.1 | fliF | NITMOv2_2151 | NITMOv2_1916 | Putative Flagellar protein FlaG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.781 |
| ALA58568.1 | fliS | NITMOv2_2151 | NITMOv2_2149 | Putative Flagellar protein FlaG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Flagellin-specific chaperone FliS. | 0.976 |
| ALA58568.1 | fliW | NITMOv2_2151 | NITMOv2_2173 | Putative Flagellar protein FlaG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.841 |
| ALA58592.1 | ALA58567.1 | NITMOv2_2175 | NITMOv2_2150 | Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Putative Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.939 |
| ALA58592.1 | ALA58568.1 | NITMOv2_2175 | NITMOv2_2151 | Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Putative Flagellar protein FlaG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.779 |
| ALA58592.1 | ALA58593.1 | NITMOv2_2175 | NITMOv2_2176 | Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | First flagellar hook-filament junction protein FlgK (modular protein); Belongs to the flagella basal body rod proteins family. | 0.967 |
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