STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA58804.1Hypothetical protein; Homologs of previously reported genes of unknown function. (146 aa)    
Predicted Functional Partners:
ALA56889.1
Putative Lactoylglutathione lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.774
ALA60461.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.774
ALA58803.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.748
ALA56457.1
Putative Glyoxalase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.695
ALA57712.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.677
ALA56960.1
Putative lactoylglutathione lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.670
ALA57239.1
Putative Proteasome, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.649
ALA58746.1
Putative 3-hydroxyisobutyrate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.622
ALA57747.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.579
ALA59678.1
Homologs of previously reported genes of unknown function.
  
     0.559
Your Current Organism:
Nitrospira moscoviensis
NCBI taxonomy Id: 42253
Other names: DSM 10035, N. moscoviensis, Nitrospira moscoviensis Ehrich et al. 2001, strain NSP M-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.