STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA59602.1Homologs of previously reported genes of unknown function. (252 aa)    
Predicted Functional Partners:
ALA59601.1
Homologs of previously reported genes of unknown function.
 
     0.881
ALA59600.1
Homologs of previously reported genes of unknown function.
       0.749
ALA60942.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.652
ALA57451.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.636
ALA60007.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.627
ALA59645.1
Homologs of previously reported genes of unknown function.
  
     0.618
ALA58040.1
Homologs of previously reported genes of unknown function.
  
     0.610
ALA59574.1
Homologs of previously reported genes of unknown function.
  
     0.596
ALA57426.1
Homologs of previously reported genes of unknown function.
  
   
 0.570
ALA60898.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.563
Your Current Organism:
Nitrospira moscoviensis
NCBI taxonomy Id: 42253
Other names: DSM 10035, N. moscoviensis, Nitrospira moscoviensis Ehrich et al. 2001, strain NSP M-1
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