STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA59790.1FemAB-related protein, PEP-CTERM system-associated. (351 aa)    
Predicted Functional Partners:
ALA59787.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.909
ALA59785.1
Glycosyltransferase.
 
     0.902
ALA59773.1
Putative Wzy family polymerase, exosortase system type 1 associated; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.820
ALA59803.1
Putative Polysaccharide deacetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.809
ALA59771.1
Glycosyl transferase, group 1.
 
     0.780
ALA59774.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.767
ALA61136.1
Homologs of previously reported genes of unknown function.
 
     0.754
ALA59786.1
Asparagine synthetase.
 
     0.733
ALA59788.1
Glycosyl transferase family 2.
       0.731
ALA59044.1
Glycosyl transferase, group 1; Function of strongly homologous gene; enzyme.
 
     0.729
Your Current Organism:
Nitrospira moscoviensis
NCBI taxonomy Id: 42253
Other names: DSM 10035, N. moscoviensis, Nitrospira moscoviensis Ehrich et al. 2001, strain NSP M-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.