STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA60075.1Hypothetical protein; Homologs of previously reported genes of unknown function. (575 aa)    
Predicted Functional Partners:
ALA60074.1
Homologs of previously reported genes of unknown function.
       0.810
ALA59039.1
Homologs of previously reported genes of unknown function.
 
     0.602
ALA59037.1
Hypothetical protein; No homology to any previously reported sequences.
 
     0.549
ALA56783.1
Homologs of previously reported genes of unknown function.
 
     0.548
ALA60076.1
Homologs of previously reported genes of unknown function.
       0.541
ALA60768.1
Lipolytic protein G-D-S-L family.
 
     0.461
Your Current Organism:
Nitrospira moscoviensis
NCBI taxonomy Id: 42253
Other names: DSM 10035, N. moscoviensis, Nitrospira moscoviensis Ehrich et al. 2001, strain NSP M-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.