STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA60117.1Hypothetical protein; Homologs of previously reported genes of unknown function. (69 aa)    
Predicted Functional Partners:
vapC-5
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
   0.960
ALA60115.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
       0.757
ALA60114.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
       0.751
vapC-6
Putative PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
   0.717
ALA60118.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
       0.623
ALA60393.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.608
ALA60113.1
Putative Phosphate-binding protein PstS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.537
vapC
Putative ribonuclease VapC2; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
   0.461
vapC-3
Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
   0.437
ALA60119.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
       0.406
Your Current Organism:
Nitrospira moscoviensis
NCBI taxonomy Id: 42253
Other names: DSM 10035, N. moscoviensis, Nitrospira moscoviensis Ehrich et al. 2001, strain NSP M-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.