STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA60962.1Putative Cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (128 aa)    
Predicted Functional Partners:
qcrB
Quinol-cytochrome c reductase, fused cytochrome b/c subunit; Function of strongly homologous gene; enzyme.
  
 
 0.969
ALA57177.1
Putative dihem cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
 
 0.775
ALA60961.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.773
ALA57564.1
Homologs of previously reported genes of unknown function.
 
 
 0.770
ALA57175.1
Putative Cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
     0.694
napG
Ferredoxin-type protein NapG; Function of strongly homologous gene; enzyme.
  
 
 0.674
ALA60391.1
Putative glucose-methanol-choline (GMC) oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
   0.616
ALA57170.1
Putative Quinol-cytochrome c reductase, FeS subunit, modulated with PRC-barrel (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.568
ALA57707.1
Putative quinol-cytochrome c reductase, iron sulfur subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.568
ALA60345.1
Putative Quinol-cytochrome c reductase, iron-sulfur subunit (Rieske iron-sulfur protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.568
Your Current Organism:
Nitrospira moscoviensis
NCBI taxonomy Id: 42253
Other names: DSM 10035, N. moscoviensis, Nitrospira moscoviensis Ehrich et al. 2001, strain NSP M-1
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