STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA61172.1Hypothetical protein; No homology to any previously reported sequences. (513 aa)    
Predicted Functional Partners:
ALA60454.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.774
flgI
Flagellar basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.582
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.563
ALA61171.1
Homologs of previously reported genes of unknown function.
       0.557
ALA57110.1
Hypothetical protein; No homology to any previously reported sequences.
 
 
 
 0.504
motA
Flagellar motor protein MotA.
 
     0.461
ALA58332.1
Flagellar basal body rod protein FlgB (modular protein).
 
     0.444
ALA58588.1
Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 
 0.439
ALA58601.1
Putative Flagella basal body P-ring formation protein FlgA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.430
ALA61169.1
Hypothetical protein; No homology to any previously reported sequences.
       0.425
Your Current Organism:
Nitrospira moscoviensis
NCBI taxonomy Id: 42253
Other names: DSM 10035, N. moscoviensis, Nitrospira moscoviensis Ehrich et al. 2001, strain NSP M-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.