Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BROXBRO1 domain and CAAX motif containing. (377 aa)    
Predicted Functional Partners:
CHMP5
Charged multivesicular body protein 5.
   
 0.953
CHMP4B
Charged multivesicular body protein 4B.
   
 0.945
CHMP4C
Charged multivesicular body protein 4C.
   
 0.939
ENSSARP00000008064
annotation not available
    
 0.818
VPS4B
Vacuolar protein sorting 4 homolog B.
   
 0.800
STAM2
Signal transducing adaptor molecule 2.
    
 0.787
ENSSARP00000003488
annotation not available
    
 0.783
CHMP2A
Charged multivesicular body protein 2A.
   
 0.762
ENSSARP00000000655
annotation not available
   
 0.754
TSG101
Tumor susceptibility 101.
   
 0.748
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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