STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COX17Cytochrome c oxidase copper chaperone COX17. (61 aa)    
Predicted Functional Partners:
COX11
Cytochrome c oxidase copper chaperone COX11.
   
 
 0.931
COX5B
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 
 0.881
COA6
Cytochrome c oxidase assembly factor 6.
   
 
 0.879
SCO1
SCO cytochrome c oxidase assembly protein 1.
    
 
 0.876
COX5A
Cytochrome c oxidase subunit 5A.
   
 
 0.868
ENSSARP00000007574
annotation not available
     
 0.868
ENSSARP00000008120
annotation not available
   
 
 0.866
ENSSARP00000009449
annotation not available
   
 
 0.848
COX6B1
Cytochrome c oxidase subunit 6B1.
   
 
 0.846
CCS
Copper chaperone for superoxide dismutase.
    
 0.841
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.