STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000000030annotation not available (171 aa)    
Predicted Functional Partners:
A1CF
APOBEC1 complementation factor.
    
 0.854
RBM47
RNA binding motif protein 47.
    
 0.672
APOB
Apolipoprotein B.
      
 0.612
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
    
 0.560
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
    
 0.511
RBM46
RNA binding motif protein 46.
    
 0.511
DND1
DND microRNA-mediated repression inhibitor 1.
    
 0.511
ENSSARP00000012985
annotation not available
      
 0.510
PTBP3
Polypyrimidine tract binding protein 3.
      
 0.493
CDA
Cytidine deaminase.
      
 0.493
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.