Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000000031annotation not available (848 aa)    
Predicted Functional Partners:
MSH4
mutS homolog 4.
  
 0.996
ENSSARP00000009864
annotation not available
  
 0.978
MLH1
mutL homolog 1.
  
 0.960
PMS1
PMS1 homolog 1, mismatch repair system component.
  
 0.933
PMS2
PMS1 homolog 2, mismatch repair system component.
  
 0.919
TOP3A
DNA topoisomerase III alpha.
   
 0.862
FANCM
FA complementation group M.
    
 
 0.823
BLM
BLM RecQ like helicase.
  
 0.817
MND1
Meiotic nuclear divisions 1.
      
 0.782
RAD51
RAD51 recombinase.
   
 0.769
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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