STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR45BWD repeat domain 45B. (251 aa)    
Predicted Functional Partners:
ENSSARP00000011646
annotation not available
    
 
 0.774
C16orf70
Chromosome 16 open reading frame 70.
   
  
 0.759
BCAS3
BCAS3 microtubule associated cell migration factor.
   
  
 0.744
WIPI2
WD repeat domain, phosphoinositide interacting 2.
   
0.731
RAB40B
RAB40B, member RAS oncogene family.
   
  
 0.725
ZFYVE1
Zinc finger FYVE-type containing 1.
    
 
 0.722
PEX1
Peroxisomal biogenesis factor 1.
    
 
 0.719
ENSSARP00000005977
annotation not available
    
 
 0.702
SGSM2
Small G protein signaling modulator 2.
      
 0.663
ENSSARP00000005378
annotation not available
    
 
 0.615
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.