Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIAP1TP53 regulated inhibitor of apoptosis 1. (76 aa)    
Predicted Functional Partners:
ENSSARP00000004235
annotation not available
    
 0.948
PUM1
Pumilio RNA binding family member 1.
    
   0.625
PUM2
Pumilio RNA binding family member 2.
    
   0.625
TP53
Tumor protein p53.
    
 0.520
PHB
Prohibitin.
    
 
 0.495
ENSSARP00000000487
annotation not available
   
   0.493
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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